Steven Salzberg : rechercher sur Z-Library

Journal:

Pertea, Mihaela, Kim, Daehwan, Pertea, Geo M, Leek, Jeffrey T, Salzberg, Steven L

Année:

1994

Langue:

english

Fichier:

PDF, 408 KB

english, 1994

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

Journal:

Nature Protocols

Année:

2016

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2016

How to map billions of short reads onto genomes

Trapnell, Cole, Salzberg, Steven L

Journal:

Langmead, Ben, Salzberg, Steven L

Année:

2009

Langue:

english

Fichier:

PDF, 274 KB

english, 2009

Fast gapped-read alignment with Bowtie 2

Journal:

Nature Methods

Année:

2012

Langue:

english

Fichier:

PDF, 231 KB

english, 2012

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Trapnell, Cole, Williams, Brian A, Pertea, Geo, Mortazavi, Ali, Kwan, Gordon, van Baren, Marijke J, Salzberg, Steven L, Wold, Barbara J, Pachter, Lior

Journal:

Kingsford, Carl, Salzberg, Steven L

Année:

2010

Langue:

english

Fichier:

PDF, 776 KB

english, 2010

What are decision trees?

Journal:

Cost, Scott, Salzberg, Steven

Année:

2008

Langue:

english

Fichier:

PDF, 355 KB

english, 2008

A weighted nearest neighbor algorithm for learning with symbolic features

Journal:

Kim, Daehwan, Paggi, Joseph M., Park, Chanhee, Bennett, Christopher, Salzberg, Steven L.

Année:

1993

Langue:

english

Fichier:

PDF, 1.40 MB

english, 1993

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Journal:

Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg

Année:

2019

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2019

A probabilistic framework for memory-based reasoning

Simon Kasif, Steven Salzberg, David Waltz, John Rachlin, David W. Aha

Journal:

Artificial Intelligence

Année:

1998

Langue:

english

Fichier:

PDF, 1.85 MB

english, 1998

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Journal:

Pertea, Mihaela, Pertea, Geo M, Antonescu, Corina M, Chang, Tsung-Cheng, Mendell, Joshua T, Salzberg, Steven L

Année:

2009

Langue:

english

Fichier:

PDF, 540 KB

english, 2009

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Journal:

Treangen, Todd J., Salzberg, Steven L.

Année:

2015

Langue:

english

Fichier:

PDF, 911 KB

english, 2015

Repetitive DNA and next-generation sequencing: computational challenges and solutions

Journal:

Nature Reviews Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 771 KB

english, 2011

Interpolated Markov Models for Eukaryotic Gene Finding

Steven L. Salzberg, Mihaela Pertea, Arthur L. Delcher, Malcolm J. Gardner, Hervé Tettelin

Journal:

Genomics

Année:

1999

Langue:

english

Fichier:

PDF, 80 KB

english, 1999

A nearest hyperrectangle learning method

Salzberg, Steven

Journal:

Année:

1991

Langue:

english

Fichier:

PDF, 1.49 MB

english, 1991

Book Review:C4.5: Programs for Machine Learningby J. Ross Quinlan. Morgan Kaufmann Publishers, Inc., 1993

Journal:

Cost, Scott, Salzberg, Steven

Année:

1994

Langue:

english

Fichier:

PDF, 417 KB

english, 1994

A Weighted Nearest Neighbor Algorithm for Learning with Symbolic Features

Journal:

Année:

1993

Langue:

english

Fichier:

PDF, 1.51 MB

english, 1993

A Nearest Hyperrectangle Learning Method

Salzberg, Steven

Journal:

Brian J Haas, Steven L Salzberg, Wei Zhu, Mihaela Pertea…

Année:

1991

Langue:

english

Fichier:

PDF, 1.60 MB

english, 1991

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

Journal:

Willerslev, Eske, Christensen, Bent, Mourier, Tobias, Hansen, Anders J., Barnes, Ian, Salzberg, Steven L.

Année:

2008

Langue:

english

Fichier:

PDF, 729 KB

english, 2008

Contamination in the Draft of the Human Genome Masquerades As Lateral Gene Transfer

Journal:

DNA Sequence - The Journal of Sequencing and Mapping

Année:

2002

Langue:

english

Fichier:

PDF, 88 KB

english, 2002

Finding Genes in DNA with a Hidden Markov Model

HENDERSON, JOHN, SALZBERG, STEVEN, FASMAN, KENNETH H.

Journal:

Journal of Computational Biology

Année:

1997

Langue:

english

Fichier:

PDF, 2.11 MB

english, 1997

Ballgown bridges the gap between transcriptome assembly and expression analysis

Frazee, Alyssa C, Pertea, Geo, Jaffe, Andrew E, Langmead, Ben, Salzberg, Steven L, Leek, Jeffrey T

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 761 KB

english, 2015

Horizontal gene transfer is not a hallmark of the human genome

Steven L. Salzberg

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 283 KB

english, 2017

Next-generation genome annotation: we still struggle to get it right

Journal:

Donald L. Allyn, Steven G. Silverberg, Arnold M. Salzberg

Année:

2019

Langue:

english

Fichier:

PDF, 306 KB

english, 2019

Endodermal sinus tumor of the vagina. Report of a case with 7-year survival and literature review of so-called “mesonephromas”

Journal:

Cancer

Année:

1971

Langue:

english

Fichier:

PDF, 802 KB

english, 1971

Testing orthogonal shapes

Kathleen Romanik, Steven Salzberg

Journal:

Computational Geometry

Année:

1995

Langue:

english

Fichier:

PDF, 866 KB

english, 1995

Testing simple polygons

Esther M. Arkin, Patrice Belleville, Joseph S.B. Mitchell, David Mount, Kathleen Romanik, Steven Salzberg, Diane Souvaine

Journal:

Computational Geometry

Année:

1997

Langue:

english

Fichier:

PDF, 1.11 MB

english, 1997

Improving pan-genome annotation using whole genome multiple alignment

Samuel V Angiuoli, Julie C Dunning Hotopp, Steven L Salzberg, Hervé Tettelin

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2011

Detection of lineage-specific evolutionary changes among primate species

Mihaela Pertea, Geo M Pertea, Steven L Salzberg

Journal:

BMC Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 671 KB

english, 2011

Managing information for concurrent engineering: Challenges and barriers

Steven Salzberg, Michael Watkins

Journal:

Research in Engineering Design

Année:

1990

Langue:

english

Fichier:

PDF, 1.62 MB

english, 1990

Genome-Wide Analysis of Repetitive Elements in Papaya

Niranjan Nagarajan, Rafael Navajas-Pérez, Mihai Pop, Maqsudul Alam, Ray Ming, Andrew H. Paterson, Steven L. Salzberg

Journal:

Tropical Plant Biology

Année:

2008

Langue:

english

Fichier:

PDF, 4.28 MB

english, 2008

The Tetrahymena thermophila genome sequence: 1. Genome-wide uniformity of macronuclear chromosome copy number in spite of amitotic (random) copy distribution

EDUARDO ORIAS, STEVEN L. SALZBERG, ARTHUR L. DELCHER

Journal:

Journal of Eukaryotic Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 391 KB

english, 2005

10.1038/35003643

Salzberg, Steven L., Pertea, Mihaela, Gardner, Malcolm J.

Journal:

Fraser, Claire M., Eisen, Jonathan A., Salzberg, Steven L.

Année:

2000

Langue:

english

Fichier:

PDF, 116 KB

english, 2000

10.1038/35021244

Journal:

Année:

2000

Langue:

english

Fichier:

PDF, 271 KB

english, 2000

Unrestricted free access works and must continue

Salzberg, Steven, Birney, Ewan, Eddy, Sean, White, Owen

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 83 KB

english, 2003

Genomics: Yeast rises again

Journal:

Salzberg, Steven, Ghedin, Elodie, Spiro, David

Année:

2003

Langue:

english

Fichier:

PDF, 90 KB

english, 2003

Shared data are key to beating threat from flu

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 124 KB

english, 2006

The contents of the syringe

Salzberg, Steven

Journal: